STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466780LYR motif containing 5b; Belongs to the complex I LYR family. (89 aa)    
Predicted Functional Partners:
etfa
Electron transfer flavoprotein subunit alpha.
   
 
 0.815
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.721
lyrm1
LYR motif containing 1; Belongs to the complex I LYR family.
      
 0.616
ENSPREP00000010030
Electron transfer flavoprotein subunit beta.
    
 
 0.587
ENSPREP00000015043
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.546
lyrm7
LYR motif containing 7; Belongs to the complex I LYR family.
   
  
 0.541
sdhaf3
Succinate dehydrogenase complex assembly factor 3.
      
 0.525
mrpl46
Mitochondrial ribosomal protein L46.
    
   0.451
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.