STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478620Ataxin 1b. (825 aa)    
Predicted Functional Partners:
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.914
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.914
ENSPREP00000022458
LAG1_DNAbind domain-containing protein.
     
  0.900
LOC103472962
Capicua transcriptional repressor a.
    
 
 0.714
cic
Capicua transcriptional repressor b.
    
 
 0.714
hbp1
HMG-box transcription factor 1.
    
 
 0.651
pim3
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
      
 0.646
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.645
LOC103472445
Neurocalcin delta b.
   
  
 0.644
LOC103462259
Uncharacterized protein.
      
 0.633
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]