Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103481180 | hells | ENSPREP00000030213 | ENSPREP00000030052 | Bromo domain-containing protein. | Helicase, lymphoid specific. | 0.721 |
RBBP7 | hells | ENSPREP00000032935 | ENSPREP00000030052 | RB binding protein 7, chromatin remodeling factor. | Helicase, lymphoid specific. | 0.737 |
RBBP7 | rbbp4 | ENSPREP00000032935 | ENSPREP00000032501 | RB binding protein 7, chromatin remodeling factor. | Retinoblastoma binding protein 4. | 0.900 |
cdc6 | exo1 | ENSPREP00000032222 | ENSPREP00000027206 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Exonuclease 1. | 0.945 |
cdc6 | hells | ENSPREP00000032222 | ENSPREP00000030052 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Helicase, lymphoid specific. | 0.783 |
cdc6 | kif11 | ENSPREP00000032222 | ENSPREP00000017489 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.820 |
cdc6 | pole3 | ENSPREP00000032222 | ENSPREP00000013485 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Polymerase (DNA directed), epsilon 3 (p17 subunit). | 0.693 |
cdc6 | rad51 | ENSPREP00000032222 | ENSPREP00000001621 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | RAD51 recombinase. | 0.740 |
exo1 | cdc6 | ENSPREP00000027206 | ENSPREP00000032222 | Exonuclease 1. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.945 |
exo1 | fancm | ENSPREP00000027206 | ENSPREP00000029321 | Exonuclease 1. | Uncharacterized protein. | 0.888 |
exo1 | hells | ENSPREP00000027206 | ENSPREP00000030052 | Exonuclease 1. | Helicase, lymphoid specific. | 0.785 |
exo1 | kif11 | ENSPREP00000027206 | ENSPREP00000017489 | Exonuclease 1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.730 |
exo1 | pole3 | ENSPREP00000027206 | ENSPREP00000013485 | Exonuclease 1. | Polymerase (DNA directed), epsilon 3 (p17 subunit). | 0.607 |
exo1 | rad51 | ENSPREP00000027206 | ENSPREP00000001621 | Exonuclease 1. | RAD51 recombinase. | 0.987 |
fancm | exo1 | ENSPREP00000029321 | ENSPREP00000027206 | Uncharacterized protein. | Exonuclease 1. | 0.888 |
fancm | hells | ENSPREP00000029321 | ENSPREP00000030052 | Uncharacterized protein. | Helicase, lymphoid specific. | 0.760 |
fancm | pole3 | ENSPREP00000029321 | ENSPREP00000013485 | Uncharacterized protein. | Polymerase (DNA directed), epsilon 3 (p17 subunit). | 0.505 |
fancm | rad51 | ENSPREP00000029321 | ENSPREP00000001621 | Uncharacterized protein. | RAD51 recombinase. | 0.996 |
hells | LOC103481180 | ENSPREP00000030052 | ENSPREP00000030213 | Helicase, lymphoid specific. | Bromo domain-containing protein. | 0.721 |
hells | RBBP7 | ENSPREP00000030052 | ENSPREP00000032935 | Helicase, lymphoid specific. | RB binding protein 7, chromatin remodeling factor. | 0.737 |
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