STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgkhDiacylglycerol kinase. (1005 aa)    
Predicted Functional Partners:
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.690
LOC103463131
Abnormal spindle microtubule assembly.
   
  
 0.606
ndc80
NDC80 kinetochore complex component.
   
  
 0.577
kif11
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.566
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.549
ttk
Ttk protein kinase.
   
  
 0.548
cep55
Centrosomal protein 55 like.
   
  
 0.536
cdc20
Cell division cycle 20 homolog.
   
 
 0.522
intu
Inturned planar cell polarity protein.
   
 
 0.522
LOC103479019
Fizzy/cell division cycle 20 related 1b.
   
 
 0.522
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.