STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475420Spermidine/spermine N1-acetyltransferase 1. (169 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.938
LOC103475794
Spermidine/spermine N1-acetyltransferase family member 2b.
  
 
0.937
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.927
agmat
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.921
maob
Amine oxidase.
     
 0.904
ENSPREP00000032699
Amine oxidase.
     
 0.904
aoc1
Amine oxidase.
     
 0.902
SAT1
Spermidine/spermine N1-acetyltransferase 1b.
  
  
 
0.901
sptbn4
Spectrin, beta, non-erythrocytic 4b.
      
 0.672
LOC103475822
Spectrin beta chain; Belongs to the spectrin family.
      
 0.672
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.