STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000030322Uncharacterized protein. (800 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
LOC103461037
RAN binding protein 2.
   
 
 0.591
LOC103460304
LRRCT domain-containing protein.
    
 0.586
gle1
GLE1 RNA export mediator.
   
 0.585
frem1
Fras1 related extracellular matrix 1a.
    
 
 0.575
nup214
Nup214_FG domain-containing protein.
   
 0.562
epha7
Eph receptor A7.
    
 0.556
edil3
EGF-like repeats and discoidin I-like domains 3a.
    
 0.554
aaas
Achalasia, adrenocortical insufficiency, alacrimia.
    
 0.554
abcb6
ATP-binding cassette, sub-family B (MDR/TAP), member 6a.
   
  
 0.553
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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