STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000030326TNFR-Cys domain-containing protein. (260 aa)    
Predicted Functional Partners:
LOC103462560
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
 0.991
LOC103477745
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.966
LOC103469572
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.942
LOC103473816
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.942
LOC103468777
TNF superfamily member 14; Belongs to the tumor necrosis factor family.
   
 
  0.907
LOC103461335
TNFR-Cys domain-containing protein.
  
 
 
0.905
LOC103461485
TNFR-Cys domain-containing protein.
  
  
 
0.902
ENSPREP00000020171
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
  0.900
tnfsf11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.763
LOC103471589
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 0.745
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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