STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctscCathepsin C; Belongs to the peptidase C1 family. (453 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
   
 
 0.906
lman1
Lectin, mannose-binding, 1.
     
 0.715
lgmn
Legumain.
   
 
 0.680
LOC103462981
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.676
mcfd2
Multiple coagulation factor deficiency 2.
     
 0.672
LOC103481969
Baculoviral IAP repeat containing 5a.
     
 0.667
LOC103467341
Baculoviral IAP repeat containing 5b.
     
 0.667
birc2
Baculoviral IAP repeat containing 2.
     
 0.659
LOC103466909
BH4_2 domain-containing protein.
     
 0.658
BCL2L1
BCL2 like 1.
     
 0.658
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.