STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462003Lymphocyte antigen 75. (1725 aa)    
Predicted Functional Partners:
LOC103473609
POU domain protein.
      
 0.649
itgb6
Integrin beta; Belongs to the integrin beta chain family.
 
 
 
 0.564
gdnf
Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake.
  
   
 0.552
cd302
CD302 molecule.
    
 
0.546
ENSPREP00000001871
SLBP_RNA_bind domain-containing protein.
      
 0.532
LOC103476613
GDNF family receptor alpha 1.
      
 0.481
gfra1
GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family.
      
 0.481
nanos3
Nanos homolog 3; Belongs to the nanos family.
      
 0.477
LOC103478941
Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.
      
 0.474
ipo4
Importin 4.
      
 0.474
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.