STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc34Zgc:153293. (328 aa)    
Predicted Functional Partners:
ccdc77
Coiled-coil domain containing 77.
   
  
 0.571
gstcd
Glutathione S-transferase, C-terminal domain containing.
    
 
 0.567
cep85
Centrosomal protein 85.
     
 0.551
LOC103472857
Coiled-coil domain containing 106b.
      
 0.549
LOC103467956
Nuclear envelope integral membrane protein 1.
      
 0.549
znf367
Zinc finger protein 367.
   
 0.495
mettl9
Methyltransferase like 9.
      
 0.469
nudt3
Nudix (nucleoside diphosphate linked moiety X)-type motif 3b.
      
 0.467
wdr18
WD repeat domain 18.
   
 0.460
ENSPREP00000030077
Uncharacterized protein.
   
 0.442
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.