STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl1aOxysterol-binding protein; Belongs to the OSBP family. (973 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.707
LOC103465062
RAB7a, member RAS oncogene family.
    
 0.707
mospd2
Motile sperm domain containing 2.
    
 
 0.598
rilp
Rab interacting lysosomal protein.
   
 0.507
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.484
LOC103470265
Uncharacterized protein.
   
 0.484
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.417
LOC103464667
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.417
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.