STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efcab7EF-hand calcium binding domain 7. (612 aa)    
Predicted Functional Partners:
LOC103462017
Uncharacterized protein.
   
 0.873
EVC2
EvC ciliary complex subunit 2.
     
 0.710
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.661
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.661
spa17
RIIa domain-containing protein.
    
   0.654
LOC103476825
Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.
    
 0.643
capn15
Calpain 15; Belongs to the peptidase C2 family.
   
 
 0.565
ENSPREP00000027150
Uncharacterized protein.
   
 0.564
Akap14
Uncharacterized protein.
    
   0.555
st13
ST13 Hsp70 interacting protein.
      
 0.550
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.