csdc2 protein (Poecilia reticulata) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

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Score

csdc2

Cold shock domain containing C2, RNA binding a. (157 aa)

Predicted Functional Partners:

polr2f

0.598

snrpd3

0.597

snrpe

0.581

Snrpf

0.573

snrnp70

0.562

mrps5

0.561

polr2b

0.553

rps11

0.546

snrpg

0.542

tufm

0.536

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Snrpf	csdc2	ENSPREP00000033403	ENSPREP00000030491	Small nuclear ribonucleoprotein polypeptide F.	Cold shock domain containing C2, RNA binding a.	0.573
Snrpf	polr2b	ENSPREP00000033403	ENSPREP00000016486	Small nuclear ribonucleoprotein polypeptide F.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.638
Snrpf	polr2f	ENSPREP00000033403	ENSPREP00000024818	Small nuclear ribonucleoprotein polypeptide F.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.842
Snrpf	snrnp70	ENSPREP00000033403	ENSPREP00000008024	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein 70 (U1).	0.995
Snrpf	snrpd3	ENSPREP00000033403	ENSPREP00000011038	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.999
Snrpf	snrpe	ENSPREP00000033403	ENSPREP00000026678	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Snrpf	snrpg	ENSPREP00000033403	ENSPREP00000007882	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein G.	0.999
csdc2	Snrpf	ENSPREP00000030491	ENSPREP00000033403	Cold shock domain containing C2, RNA binding a.	Small nuclear ribonucleoprotein polypeptide F.	0.573
csdc2	mrps5	ENSPREP00000030491	ENSPREP00000002339	Cold shock domain containing C2, RNA binding a.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.561
csdc2	polr2b	ENSPREP00000030491	ENSPREP00000016486	Cold shock domain containing C2, RNA binding a.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.553
csdc2	polr2f	ENSPREP00000030491	ENSPREP00000024818	Cold shock domain containing C2, RNA binding a.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.598
csdc2	rps11	ENSPREP00000030491	ENSPREP00000021648	Cold shock domain containing C2, RNA binding a.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.546
csdc2	snrnp70	ENSPREP00000030491	ENSPREP00000008024	Cold shock domain containing C2, RNA binding a.	Small nuclear ribonucleoprotein 70 (U1).	0.562
csdc2	snrpd3	ENSPREP00000030491	ENSPREP00000011038	Cold shock domain containing C2, RNA binding a.	Small nuclear ribonucleoprotein Sm D3.	0.597
csdc2	snrpe	ENSPREP00000030491	ENSPREP00000026678	Cold shock domain containing C2, RNA binding a.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.581
csdc2	snrpg	ENSPREP00000030491	ENSPREP00000007882	Cold shock domain containing C2, RNA binding a.	Small nuclear ribonucleoprotein G.	0.542
csdc2	tufm	ENSPREP00000030491	ENSPREP00000020585	Cold shock domain containing C2, RNA binding a.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.536
mrps5	csdc2	ENSPREP00000002339	ENSPREP00000030491	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Cold shock domain containing C2, RNA binding a.	0.561
mrps5	polr2b	ENSPREP00000002339	ENSPREP00000016486	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.954
mrps5	polr2f	ENSPREP00000002339	ENSPREP00000024818	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.765