STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000030577Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
ENSPREP00000030560
Uncharacterized protein.
 
     0.933
ENSPREP00000030522
Uncharacterized protein.
 
    
0.909
ENSPREP00000033823
Uncharacterized protein.
 
   
  0.876
ENSPREP00000033817
Uncharacterized protein.
 
   
 
0.838
LOC103463058
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
 
   
 
0.827
lrp8
Uncharacterized protein.
 
   
 
0.815
vldlr
Very low density lipoprotein receptor.
 
   
 
0.800
ENSPREP00000033800
Uncharacterized protein.
 
   
  0.793
ldlr
Low density lipoprotein receptor a.
 
   
 
0.648
agrn
Agrin.
    
 0.597
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.