STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cabin1Calcineurin binding protein 1. (2223 aa)    
Predicted Functional Partners:
LOC103470832
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.958
LOC103480976
Uncharacterized protein.
   
 0.950
mef2b
Myocyte enhancer factor 2b.
    
 
 0.943
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 0.930
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 0.884
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
LOC103472498
MADS-box domain-containing protein.
    
 
 0.630
mef2d
Myocyte enhancer factor 2d.
    
 
 0.630
stk40
Serine/threonine kinase 40.
    
 
 0.619
LOC103461037
RAN binding protein 2.
   
 
 0.602
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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