STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103461867Insulin-like growth factor binding protein 5a. (270 aa)    
Predicted Functional Partners:
igf1
Insulin-like growth factor 1.
   
 0.944
igf2
IlGF domain-containing protein.
   
 0.773
igfals
Insulin-like growth factor binding protein, acid labile subunit.
   
 0.736
pappa
Pregnancy-associated plasma protein A, pappalysin 1a.
    
 0.683
ENSPREP00000031599
LRRCT domain-containing protein.
   
 0.654
IGFBP3
Insulin like growth factor binding protein 3.
  
  
0.495
LOC103469251
FAM20C golgi associated secretory pathway kinase a.
    
 0.493
LOC103470141
Growth hormone receptor a.
   
  
 0.488
wwp2
E3 ubiquitin-protein ligase.
      
 0.474
ptgs2
Prostaglandin-endoperoxide synthase 2b.
      
 0.449
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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