STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466804Potassium inwardly-rectifying channel, subfamily J, member 11, like. (435 aa)    
Predicted Functional Partners:
LOC103460789
ATP-binding cassette, sub-family C (CFTR/MRP), member 9.
 
 
 0.594
abcc8
ATP-binding cassette, sub-family C (CFTR/MRP), member 8.
 
 
 0.591
ENSPREP00000030866
Potassium inwardly-rectifying channel, subfamily J, member 11, like.
      
 0.550
abcc5
ATP-binding cassette, sub-family C (CFTR/MRP), member 5.
   
 0.403
abcc12
ATP-binding cassette, sub-family C (CFTR/MRP), member 12.
   
 0.403
LOC103471521
Si:ch211-221f10.2.
   
 0.403
ABCC4
ATP binding cassette subfamily C member 4.
 
 
 0.402
LOC103476707
Uncharacterized protein.
   
 0.402
LOC103474464
ATP-binding cassette, sub-family C (CFTR/MRP), member 4.
 
 
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.