STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000030955Bloodthirsty-related gene family, member 12. (569 aa)    
Predicted Functional Partners:
LOC103472755
Zinc finger protein 219.
   
 0.520
LOC103459613
Zgc:113337.
  
     0.502
ENSPREP00000005404
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.498
LOC103472754
Rho guanine nucleotide exchange factor (GEF) 40.
   
  
 0.482
LOC103468730
Si:ch211-66e2.5.
  
 
  0.437
ENSPREP00000002491
Apolipoprotein L, 1.
  
     0.409
LOC103460332
Zgc:109744.
  
     0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.