STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mterf2Mitochondrial transcription termination factor 2. (375 aa)    
Predicted Functional Partners:
mrpl36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.569
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.554
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.525
mrrf
Mitochondrial ribosome recycling factor.
    
 
 0.508
pink1
PTEN induced kinase 1.
     
 0.503
fastkd2
FAST kinase domains 2.
   
 
 0.499
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.491
rag2
Recombination activating gene 2.
  
     0.478
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
   0.458
rpl4
Ribosomal protein L4.
    
   0.451
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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