clip1 protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

clip1

CAP-GLY domain containing linker protein 1a. (2180 aa)

Predicted Functional Partners:

Mtor

0.919

trim36

0.682

nudc

0.631

LOC103480555

0.622

dctn1

0.621

clasp2

0.613

Clasp1

0.613

CLASP1

0.613

bub3

0.612

cdc20

0.591

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLASP1	LOC103480555	ENSPREP00000018859	ENSPREP00000021527	Uncharacterized protein.	Dynactin 1a.	0.623
CLASP1	bub3	ENSPREP00000018859	ENSPREP00000010595	Uncharacterized protein.	BUB3 mitotic checkpoint protein.	0.618
CLASP1	cdc20	ENSPREP00000018859	ENSPREP00000004130	Uncharacterized protein.	Cell division cycle 20 homolog.	0.624
CLASP1	clip1	ENSPREP00000018859	ENSPREP00000031005	Uncharacterized protein.	CAP-GLY domain containing linker protein 1a.	0.613
CLASP1	dctn1	ENSPREP00000018859	ENSPREP00000010688	Uncharacterized protein.	Dynactin 1b.	0.623
CLASP1	nudc	ENSPREP00000018859	ENSPREP00000021892	Uncharacterized protein.	NudC nuclear distribution protein.	0.690
CLASP1	trim36	ENSPREP00000018859	ENSPREP00000027273	Uncharacterized protein.	Tripartite motif containing 36.	0.582
Clasp1	LOC103480555	ENSPREP00000012453	ENSPREP00000021527	Uncharacterized protein.	Dynactin 1a.	0.623
Clasp1	bub3	ENSPREP00000012453	ENSPREP00000010595	Uncharacterized protein.	BUB3 mitotic checkpoint protein.	0.618
Clasp1	cdc20	ENSPREP00000012453	ENSPREP00000004130	Uncharacterized protein.	Cell division cycle 20 homolog.	0.624
Clasp1	clip1	ENSPREP00000012453	ENSPREP00000031005	Uncharacterized protein.	CAP-GLY domain containing linker protein 1a.	0.613
Clasp1	dctn1	ENSPREP00000012453	ENSPREP00000010688	Uncharacterized protein.	Dynactin 1b.	0.623
Clasp1	nudc	ENSPREP00000012453	ENSPREP00000021892	Uncharacterized protein.	NudC nuclear distribution protein.	0.690
Clasp1	trim36	ENSPREP00000012453	ENSPREP00000027273	Uncharacterized protein.	Tripartite motif containing 36.	0.582
LOC103480555	CLASP1	ENSPREP00000021527	ENSPREP00000018859	Dynactin 1a.	Uncharacterized protein.	0.623
LOC103480555	Clasp1	ENSPREP00000021527	ENSPREP00000012453	Dynactin 1a.	Uncharacterized protein.	0.623
LOC103480555	clasp2	ENSPREP00000021527	ENSPREP00000008171	Dynactin 1a.	Cytoplasmic linker associated protein 2.	0.623
LOC103480555	clip1	ENSPREP00000021527	ENSPREP00000031005	Dynactin 1a.	CAP-GLY domain containing linker protein 1a.	0.622
LOC103480555	trim36	ENSPREP00000021527	ENSPREP00000027273	Dynactin 1a.	Tripartite motif containing 36.	0.646
Mtor	clip1	ENSPREP00000016474	ENSPREP00000031005	Serine/threonine-protein kinase TOR.	CAP-GLY domain containing linker protein 1a.	0.919