STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST5Sulfotransferase; Belongs to the sulfotransferase 1 family. (343 aa)    
Predicted Functional Partners:
LOC103458997
Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.480
LOC103471061
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.480
gpc2
Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.480
LOC103461949
Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.480
LOC103478412
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.445
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.422
LOC103479399
Glypican 1b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.404
LOC103463225
Glypican 1a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.404
glce
Glucuronic acid epimerase b.
      
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.