STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466355BTB (POZ) domain containing 11b. (619 aa)    
Predicted Functional Partners:
ENSPREP00000033335
Uncharacterized protein.
 
      0.900
bbs9
Bardet-Biedl syndrome 9.
    
 0.529
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.506
bbs7
Bardet-Biedl syndrome 7.
    
 0.490
ttc8
Tetratricopeptide repeat domain 8.
    
 0.482
ubxn7
UBX domain protein 7.
    
  0.431
LOC103470579
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.421
nbr1
NBR1 autophagy cargo receptor a.
    
 0.418
ckap5
Cytoskeleton associated protein 5.
      
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.