STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsrc2Arginine/serine-rich coiled-coil 2. (340 aa)    
Predicted Functional Partners:
LOC103457395
RNA binding motif protein 25b.
   
  
 0.694
LOC103458235
RNA binding motif protein 25a.
   
  
 0.694
arid4b
Translocase of outer mitochondrial membrane 20.
   
    0.691
ythdc1
YTH domain containing 1.
   
    0.569
il34
Interleukin 34.
   
 0.509
znf277
Zinc finger protein 277.
    
 
 0.507
Kitlg
Kit ligand a.
    
 0.490
prpf38b
Uncharacterized protein.
   
    0.487
LOC103464043
Mesoderm induction early response 1, family member 2.
      
 0.476
clg9h9orf85
Zgc:101016.
      
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.