STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlec1DLEC1 cilia and flagella associated protein. (1692 aa)    
Predicted Functional Partners:
Rsph14
Uncharacterized protein.
    
 
 0.613
cfap161
Uncharacterized protein.
   
 0.599
lrrc34
Leucine rich repeat containing 34.
    
 0.570
spata18
Spermatogenesis associated 18.
      
 0.544
zswim2
Zinc finger, SWIM-type containing 2.
    
 
 0.475
CEP128
Centrosomal protein 128.
    
 0.467
LOC103470385
Cilia and flagella associated protein 52.
   
 0.447
ENSPREP00000024730
Uncharacterized protein.
   
 0.447
rsph10b
Radial spoke head 10 homolog B.
    
 
 0.417
cfap70
Uncharacterized protein.
  
 0.409
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.