STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kmt2dLysine (K)-specific methyltransferase 2D. (3999 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.917
rbbp5
Retinoblastoma binding protein 5.
    
 0.904
Kmt2c
Uncharacterized protein.
 
     
0.786
wdr5
WD repeat domain 5.
   
 0.780
wsb2
WD repeat and SOCS box containing 2.
   
 0.669
wsb1
WD repeat and SOCS box containing 1.
   
 0.669
cenpn
Centromere protein N.
   
 0.665
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
     
  0.650
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
     
  0.650
LOC103467472
Nuclear receptor coactivator 6.
   
 0.626
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.