STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000031260Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
frmpd2
FERM and PDZ domain containing 2.
 
  
  0.871
ENSPREP00000031322
Uncharacterized protein.
 
      0.805
ENSPREP00000029577
Erythrocyte membrane protein band 4.1a.
 
 
    0.770
LOC103466619
FERM domain containing 5.
 
      0.645
plekha2
Uncharacterized protein.
    
 0.628
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.610
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 
 0.608
EPB41L3
Erythrocyte membrane protein band 4.1-like 3a.
 
 
    0.565
ENSPREP00000031334
KIND domain-containing protein.
 
      0.565
ENSPREP00000020797
TNFR-Cys domain-containing protein.
   
 
 0.522
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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