ENSPREP00000031459 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000031459

Uncharacterized protein. (116 aa)

Predicted Functional Partners:

ERG28

0.681

NDUFA13

0.665

ndufs7

0.589

ndufb7

0.585

ndufa11

0.583

tmem141

0.560

clpp

0.551

ndufa7

0.546

mrpl41

0.519

ndufb11

0.512

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000031459	ERG28	ENSPREP00000031459	ENSPREP00000014082	Uncharacterized protein.	Ergosterol biosynthesis 28 homolog.	0.681
ENSPREP00000031459	NDUFA13	ENSPREP00000031459	ENSPREP00000026738	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A13.	0.665
ENSPREP00000031459	clpp	ENSPREP00000031459	ENSPREP00000010865	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit.	0.551
ENSPREP00000031459	mrpl41	ENSPREP00000031459	ENSPREP00000020497	Uncharacterized protein.	Mitochondrial ribosomal protein L41.	0.519
ENSPREP00000031459	ndufa11	ENSPREP00000031459	ENSPREP00000030020	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A11.	0.583
ENSPREP00000031459	ndufa7	ENSPREP00000031459	ENSPREP00000012532	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A7.	0.546
ENSPREP00000031459	ndufb11	ENSPREP00000031459	ENSPREP00000013323	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit B11.	0.512
ENSPREP00000031459	ndufb7	ENSPREP00000031459	ENSPREP00000000441	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit B7.	0.585
ENSPREP00000031459	ndufs7	ENSPREP00000031459	ENSPREP00000016290	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.	0.589
ENSPREP00000031459	tmem141	ENSPREP00000031459	ENSPREP00000022127	Uncharacterized protein.	Transmembrane protein 141.	0.560
ERG28	ENSPREP00000031459	ENSPREP00000014082	ENSPREP00000031459	Ergosterol biosynthesis 28 homolog.	Uncharacterized protein.	0.681
NDUFA13	ENSPREP00000031459	ENSPREP00000026738	ENSPREP00000031459	NADH:ubiquinone oxidoreductase subunit A13.	Uncharacterized protein.	0.665
NDUFA13	clpp	ENSPREP00000026738	ENSPREP00000010865	NADH:ubiquinone oxidoreductase subunit A13.	ATP-dependent Clp protease proteolytic subunit.	0.581
NDUFA13	ndufa11	ENSPREP00000026738	ENSPREP00000030020	NADH:ubiquinone oxidoreductase subunit A13.	NADH:ubiquinone oxidoreductase subunit A11.	0.997
NDUFA13	ndufa7	ENSPREP00000026738	ENSPREP00000012532	NADH:ubiquinone oxidoreductase subunit A13.	NADH:ubiquinone oxidoreductase subunit A7.	0.999
NDUFA13	ndufb11	ENSPREP00000026738	ENSPREP00000013323	NADH:ubiquinone oxidoreductase subunit A13.	NADH:ubiquinone oxidoreductase subunit B11.	0.998
NDUFA13	ndufb7	ENSPREP00000026738	ENSPREP00000000441	NADH:ubiquinone oxidoreductase subunit A13.	NADH:ubiquinone oxidoreductase subunit B7.	0.999
NDUFA13	ndufs7	ENSPREP00000026738	ENSPREP00000016290	NADH:ubiquinone oxidoreductase subunit A13.	NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.	0.999
clpp	ENSPREP00000031459	ENSPREP00000010865	ENSPREP00000031459	ATP-dependent Clp protease proteolytic subunit.	Uncharacterized protein.	0.551
clpp	NDUFA13	ENSPREP00000010865	ENSPREP00000026738	ATP-dependent Clp protease proteolytic subunit.	NADH:ubiquinone oxidoreductase subunit A13.	0.581