STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000031469Uncharacterized protein. (1682 aa)    
Predicted Functional Partners:
ENSPREP00000031495
WD_REPEATS_REGION domain-containing protein.
 
    
 0.913
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.698
tbc1d16
TBC1 domain family, member 16.
      
 0.651
rack1
Receptor for activated C kinase 1.
    
 0.644
wdfy2
WD repeat and FYVE domain containing 2.
   
  
 0.630
wdfy1
WD repeat and FYVE domain containing 1.
   
  
 0.630
becn1
Beclin 1, autophagy related.
    
 
 0.581
smpd2
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.579
vta1
Vesicle (multivesicular body) trafficking 1.
    
 
 0.578
rccd1
Uncharacterized protein.
   
 
 0.569
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (14%) [HD]