STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd6Major facilitator superfamily domain containing 6a. (802 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.629
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.621
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.548
miga1
Mitoguardin 1.
      
 0.541
mfsd8
Major facilitator superfamily domain containing 8.
      
 0.540
unc93a
Unc-93 homolog A.
      
 0.528
csgalnact2
Hexosyltransferase.
      
 0.475
LOC103468682
Uncharacterized protein.
      
 0.472
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.472
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.472
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.