STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103463084Uncharacterized protein. (985 aa)    
Predicted Functional Partners:
LOC103474014
Ephrin-A5a; Belongs to the ephrin family.
   
 0.770
ENSPREP00000032273
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.757
EFNA2
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.732
LOC103480564
Ephrin-B3a; Belongs to the ephrin family.
   
 0.732
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
 0.730
ENSPREP00000025471
Si:dkey-246i14.3; Belongs to the ephrin family.
   
 0.718
LOC103472698
Ephrin-A1a; Belongs to the ephrin family.
   
 0.714
efnb1
Ephrin-B1; Belongs to the ephrin family.
   
 0.714
LOC103478166
Ephrin-A3b; Belongs to the ephrin family.
   
 0.683
LOC103472699
Ephrin-A3a; Belongs to the ephrin family.
   
 0.683
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.