STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103470204Uncharacterized protein. (680 aa)    
Predicted Functional Partners:
btbd9
BTB (POZ) domain containing 9.
      
 0.472
ENSPREP00000029558
Uncharacterized protein.
  
 
   0.449
mrps33
Mitochondrial ribosomal protein S33.
    
 0.447
ENSPREP00000029470
Uncharacterized protein.
  
     0.447
wdr24
WD repeat domain 24.
   
 
  0.438
LOC103477899
Uncharacterized protein.
  
     0.428
LOC103467250
MBD domain-containing protein.
  
     0.426
LOC103467243
Uncharacterized protein.
  
     0.418
fam185a
Family with sequence similarity 185 member A.
      
 0.416
insyn2b
Uncharacterized protein.
  
  0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.