STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000031720Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1). (113 aa)    
Predicted Functional Partners:
LOC103459367
Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family.
    
 0.993
CXCR4
C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
   
 0.989
LOC103478845
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.979
ENSPREP00000019776
C-C motif chemokine.
    
 0.946
cxcl14
Chemokine (C-X-C motif) ligand 14.
  
 
 0.932
LOC103479265
SCY domain-containing protein.
   
 0.931
ENSPREP00000032244
SCY domain-containing protein.
   
 0.914
LOC103464854
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
  
  
 
0.901
LOC103475941
C-X-C motif chemokine.
    
 0.897
LOC103469546
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
  
 0.863
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.