STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trarg1Trafficking regulator of GLUT4 (SLC2A4) 1a. (184 aa)    
Predicted Functional Partners:
lrrc42
Leucine rich repeat containing 42.
      
 0.579
snap47
Synaptosome associated protein 47.
    
 0.563
Bhlha9
Basic helix-loop-helix family, member a9.
      
 0.560
RPL36A
Ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
    
 0.552
ZBTB21
Zinc finger and BTB domain containing 21.
      
 0.549
zfpm1
Zinc finger protein, FOG family member 1.
      
 0.549
lpcat3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
      
 0.531
tmem59l
Transmembrane protein 59-like.
    
 
 0.506
ywhae
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1; Belongs to the 14-3-3 family.
    
 0.502
armc7
Armadillo repeat containing 7.
      
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.