STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476963Amino_oxidase domain-containing protein. (501 aa)    
Predicted Functional Partners:
tysnd1
Trypsin domain containing 1.
     
 0.704
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.620
pex10
Peroxisomal biogenesis factor 10.
     
 0.615
pex14
Peroxisomal biogenesis factor 14.
     
 0.614
amd1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.565
sms
Spermine synthase.
      
 0.549
LOC103475794
Spermidine/spermine N1-acetyltransferase family member 2b.
      
 0.549
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
      
 0.545
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.535
LOC103464006
Sterol carrier protein 2b.
   
 
 0.535
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.