STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dab2ipDAB2 interacting protein b. (1243 aa)    
Predicted Functional Partners:
LOC103477798
Si:ch211-1i11.3.
    
 0.921
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.921
LOC103469572
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.917
LOC103473816
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.917
LOC103460382
Uncharacterized protein.
  
  
 
0.902
LOC103467292
DLC1 Rho GTPase activating protein.
    
 
 0.575
arhgap5
Rho GTPase activating protein 5.
    
 0.570
LOC103475743
Rho GTPase activating protein 35b.
    
 0.570
arhgap35
Uncharacterized protein.
    
 0.570
LOC103459902
Uncharacterized protein.
    
 0.534
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.