STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpdCarboxypeptidase D, a. (1389 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
  0.941
igf2r
Insulin-like growth factor 2 receptor.
   
 
 0.698
ENSPREP00000011525
Uncharacterized protein.
    
 0.665
ap1g1
AP-1 complex subunit gamma.
   
 
 0.649
LOC103464892
Sortilin.
     
 0.643
sort1
Sortilin.
     
 0.643
ENSPREP00000021372
AP4E_app_platf domain-containing protein.
   
 
  0.576
Ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
   
 
  0.576
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
  0.560
slc26a5
Solute carrier family 26 member 5.
   
  
 0.552
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.