STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103470310Si:ch211-156l18.8. (1263 aa)    
Predicted Functional Partners:
LOC103465295
Si:dkey-28e7.3.
      
 0.647
ENSPREP00000027150
Uncharacterized protein.
    
   0.499
nyx
Nyctalopin.
     
 0.473
ENSPREP00000021903
Uncharacterized protein.
    
 
 0.431
LOC103471829
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
     
 0.419
socs6
Suppressor of cytokine signaling 6a.
      
 0.412
LOC103462170
Guanine nucleotide binding protein (G protein), beta 5b.
    
 0.409
gnb5
Guanine nucleotide binding protein (G protein), beta 5a.
    
 0.409
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.