STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spef1Zgc:66426. (171 aa)    
Predicted Functional Partners:
spef2
Calponin-homology (CH) domain-containing protein.
   
 
 0.558
efhc1
EF-hand domain (C-terminal) containing 1.
  
 
 
 0.519
spag6
Sperm associated antigen 6.
  
 
 0.480
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
   
 
 0.477
spata4
Spermatogenesis associated 4.
  
 
 
0.462
efhc2
EF-hand domain (C-terminal) containing 2.
  
 
 
 0.454
LOC103469295
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.451
cfap70
Uncharacterized protein.
   
 0.451
LOC103468085
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.451
LOC103476353
Uncharacterized protein.
   
 0.451
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.