LOC103476976 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103476976

Component of inhibitor of nuclear factor kappa B kinase complex. (689 aa)

Predicted Functional Partners:

nfkbia

0.988

LOC103457805

0.988

traf6

0.980

ENSPREP00000018384

0.977

LOC103481612

0.976

LOC103468661

0.976

map3k7

0.974

tab1

0.967

LOC103474789

0.963

LOC103476681

0.963

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000018384	LOC103468661	ENSPREP00000018384	ENSPREP00000013046	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase kinase 14a.	0.919
ENSPREP00000018384	LOC103476976	ENSPREP00000018384	ENSPREP00000032137	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.977
ENSPREP00000018384	LOC103481612	ENSPREP00000018384	ENSPREP00000012735	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	ADP-ribosylation factor 2b.	0.919
ENSPREP00000018384	map3k7	ENSPREP00000018384	ENSPREP00000002180	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase kinase 7.	0.901
ENSPREP00000018384	tab1	ENSPREP00000018384	ENSPREP00000000216	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TGF-beta activated kinase 1/MAP3K7 binding protein 1.	0.997
ENSPREP00000018384	traf6	ENSPREP00000018384	ENSPREP00000005082	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.997
LOC103457805	LOC103468661	ENSPREP00000027480	ENSPREP00000013046	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Mitogen-activated protein kinase kinase kinase 14a.	0.484
LOC103457805	LOC103476976	ENSPREP00000027480	ENSPREP00000032137	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.988
LOC103457805	LOC103481612	ENSPREP00000027480	ENSPREP00000012735	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	ADP-ribosylation factor 2b.	0.484
LOC103457805	nfkbia	ENSPREP00000027480	ENSPREP00000012072	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.903
LOC103457805	traf6	ENSPREP00000027480	ENSPREP00000005082	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.712
LOC103468661	ENSPREP00000018384	ENSPREP00000013046	ENSPREP00000018384	Mitogen-activated protein kinase kinase kinase 14a.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.919
LOC103468661	LOC103457805	ENSPREP00000013046	ENSPREP00000027480	Mitogen-activated protein kinase kinase kinase 14a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.484
LOC103468661	LOC103476976	ENSPREP00000013046	ENSPREP00000032137	Mitogen-activated protein kinase kinase kinase 14a.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.976
LOC103468661	LOC103481612	ENSPREP00000013046	ENSPREP00000012735	Mitogen-activated protein kinase kinase kinase 14a.	ADP-ribosylation factor 2b.	0.906
LOC103468661	map3k7	ENSPREP00000013046	ENSPREP00000002180	Mitogen-activated protein kinase kinase kinase 14a.	Mitogen-activated protein kinase kinase kinase 7.	0.919
LOC103468661	nfkbia	ENSPREP00000013046	ENSPREP00000012072	Mitogen-activated protein kinase kinase kinase 14a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.484
LOC103468661	traf6	ENSPREP00000013046	ENSPREP00000005082	Mitogen-activated protein kinase kinase kinase 14a.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.665
LOC103474789	LOC103476681	ENSPREP00000008269	ENSPREP00000012589	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.400
LOC103474789	LOC103476976	ENSPREP00000008269	ENSPREP00000032137	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.963