STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blzf1Basic leucine zipper nuclear factor 1. (383 aa)    
Predicted Functional Partners:
LOC103478948
Golgi reassembly stacking protein 2.
   
 0.894
GORASP2
GRASP55_65 domain-containing protein.
   
 0.894
LOC103456555
Golgi reassembly stacking protein 1.
   
 0.894
gorasp1
Golgi reassembly stacking protein 1a.
   
 0.894
rab2a
RAB2A, member RAS oncogene family.
    
 0.860
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 0.788
acbd3
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.680
ulk3
Unc-51 like kinase 3; Belongs to the protein kinase superfamily.
      
 0.574
golga5
Golgin A5.
   
  
 0.561
LOC103468264
Leucine rich adaptor protein 1.
      
 0.543
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.