STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472829Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
ENSPREP00000026524
Uncharacterized protein.
 
   
 0.940
ENSPREP00000006058
Versican a.
 
 
 
 0.931
ENSPREP00000020240
Uncharacterized protein.
 
 
 
 0.931
LOC103473173
Hyaluronan and proteoglycan link protein 1b.
 
  
 0.915
ENSPREP00000018724
Uncharacterized protein.
 
      0.892
LOC103470440
Hyaluronan and proteoglycan link protein 1a.
 
  
 0.890
hapln3
Hyaluronan and proteoglycan link protein 3.
 
      0.889
hapln2
Hyaluronan and proteoglycan link protein 2.
 
 
  
 0.867
hapln4
Hyaluronan and proteoglycan link protein 4.
 
  
  0.803
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
     
 0.732
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.