STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sh3bgrlSH3 domain binding glutamate-rich protein like. (126 aa)    
Predicted Functional Partners:
selenoo
Selenoprotein O1.
   
    0.588
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
      
 0.550
srsf7
Serine and arginine rich splicing factor 7b.
      
 0.545
apool
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.544
LOC103478204
RBR-type E3 ubiquitin transferase.
      
 0.537
LOC103459606
Uncharacterized protein.
   
    0.520
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.516
hmgn5
High mobility group nucleosome binding domain 6.
   
  
 0.483
cnot4
CCR4-NOT transcription complex, subunit 4a.
      
 0.440
ENSPREP00000026271
AMMECR1 domain-containing protein.
   
  
 0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]