STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457358Basic leucine zipper and W2 domains 1a. (419 aa)    
Predicted Functional Partners:
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
    
 
 0.563
snrpa
Small nuclear ribonucleoprotein polypeptide A.
   
  
 0.558
cirbp
Cold inducible RNA binding protein b.
   
 
 0.500
snx13
Sorting nexin 13.
      
 0.463
ankmy2
Ankyrin repeat and MYND domain containing 2a.
      
 0.437
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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