STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfe3Transcription factor binding to IGHM enhancer 3b. (490 aa)    
Predicted Functional Partners:
LOC103465526
Melanocyte inducing transcription factor a.
  
  
0.878
tfeb
Transcription factor EB.
  
 
0.874
LOC103468460
E1A binding protein p300 b.
    
 0.451
LOC103482005
E1A binding protein p300 a.
    
 0.451
sumo1
Small ubiquitin like modifier 1.
    
  0.448
ENSPREP00000016378
Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.436
Mtor
Serine/threonine-protein kinase TOR.
    
 
 0.436
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.435
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b; Belongs to the 14-3-3 family.
    
 0.419
ywhaq
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b; Belongs to the 14-3-3 family.
    
 0.419
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.