STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spcs3Signal peptidase complex subunit 3. (180 aa)    
Predicted Functional Partners:
spcs2
Signal peptidase complex subunit 2.
   
 0.993
spcs1
Signal peptidase complex subunit 1.
   
 0.992
sec11a
Signal peptidase complex catalytic subunit SEC11.
   
 0.982
grp
Uncharacterized protein.
   
 0.974
immp2l
Mitochondrial inner membrane protease subunit.
   
 0.839
itfg2
Integrin alpha FG-GAP repeat containing 2.
   
 0.839
LOC103473172
X-ray repair complementing defective repair in Chinese hamster cells 4.
   
 0.839
immp1l
Mitochondrial inner membrane protease subunit.
   
 0.839
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.727
auh
AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
    0.673
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.