STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf26Ring finger protein 26. (412 aa)    
Predicted Functional Partners:
rps25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
      
 0.681
slc37a4
Solute carrier family 37 member 4a.
      
 0.681
LOC103471564
Uncharacterized protein.
      
 0.524
LOC103476687
Solute carrier family 29 member 1a.
      
 0.524
tmem33
Transmembrane protein 33.
    
 
 0.510
LOC103476137
Solute carrier family 37 member 4b.
      
 0.461
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.458
LOC103465053
Ubiquitin-like modifier activating enzyme 3.
     
 0.458
TMEM43
Uncharacterized protein.
    
 
 0.433
zdhhc1
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.431
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.