STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cblCbl proto-oncogene, E3 ubiquitin protein ligase. (848 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.961
LOC103464537
Macrophage stimulating 1 receptor a.
   
 0.961
mst1r
Macrophage stimulating 1 receptor b.
   
 0.961
grb2
Growth factor receptor-bound protein 2b.
    
 0.948
LOC103476047
Sprouty RTK signaling antagonist 2.
    
 0.922
LOC103465566
Si:ch211-25d12.7.
    
 0.831
rps27a
Ribosomal protein S27a.
    
  0.789
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.787
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.778
spry4
Sprouty homolog 4 (Drosophila).
    
 0.774
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.