STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clg10h4orf47Zgc:153146. (260 aa)    
Predicted Functional Partners:
armc3
Armadillo repeat containing 3.
   
  
 0.654
LOC103460395
Uncharacterized protein.
      
 0.647
efcab1
Uncharacterized protein.
      
 0.645
iqub
IQ motif and ubiquitin domain containing.
      
 0.633
ENSPREP00000026151
Uncharacterized protein.
   
  
 0.572
ENSPREP00000004409
Uncharacterized protein.
   
  
 0.570
ccdc96
DUF4201 domain-containing protein.
    
 0.564
enkd1
Enkurin domain containing 1.
      
 0.542
armc4
Armadillo repeat containing 4.
   
  
 0.484
EVC2
EvC ciliary complex subunit 2.
      
 0.432
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.