STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475777Phospholipase. (917 aa)    
Predicted Functional Partners:
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 0.752
rab8b
Multiple EGF-like-domains 8.
   
 
 0.716
sncaip
Synuclein, alpha interacting protein.
   
 
 0.685
LOC103479175
RAB3A, member RAS oncogene family, b.
      
 0.681
LOC103463328
RAB3A, member RAS oncogene family, b.
      
 0.681
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
      
 0.681
psph
Phosphoserine phosphatase.
    
 0.678
ENSPREP00000009772
Calmodulin-like 4a.
   
  
 0.645
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
 
 0.626
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
    
 0.623
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.