ENSPREP00000033113 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000033113

Uncharacterized protein. (315 aa)

Predicted Functional Partners:

ENSPREP00000023634

0.891

ENSPREP00000023655

0.886

ENSPREP00000033100

0.876

LOC103465265

0.864

LOC103467350

0.850

stk17b

0.608

ENSPREP00000026294

0.578

dapk2

0.559

LOC103469400

0.532

dapk3

0.483

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000023634	ENSPREP00000023655	ENSPREP00000023634	ENSPREP00000023655	Uncharacterized protein.	Protein kinase domain-containing protein.	0.900
ENSPREP00000023634	ENSPREP00000033113	ENSPREP00000023634	ENSPREP00000033113	Uncharacterized protein.	Uncharacterized protein.	0.891
ENSPREP00000023655	ENSPREP00000023634	ENSPREP00000023655	ENSPREP00000023634	Protein kinase domain-containing protein.	Uncharacterized protein.	0.900
ENSPREP00000023655	ENSPREP00000033100	ENSPREP00000023655	ENSPREP00000033100	Protein kinase domain-containing protein.	Kalirin RhoGEF kinase b.	0.898
ENSPREP00000023655	ENSPREP00000033113	ENSPREP00000023655	ENSPREP00000033113	Protein kinase domain-containing protein.	Uncharacterized protein.	0.886
ENSPREP00000023655	LOC103465265	ENSPREP00000023655	ENSPREP00000019032	Protein kinase domain-containing protein.	Uncharacterized protein.	0.851
ENSPREP00000023655	LOC103467350	ENSPREP00000023655	ENSPREP00000031428	Protein kinase domain-containing protein.	Uncharacterized protein.	0.599
ENSPREP00000026294	ENSPREP00000033113	ENSPREP00000026294	ENSPREP00000033113	Trio Rho guanine nucleotide exchange factor a.	Uncharacterized protein.	0.578
ENSPREP00000033100	ENSPREP00000023655	ENSPREP00000033100	ENSPREP00000023655	Kalirin RhoGEF kinase b.	Protein kinase domain-containing protein.	0.898
ENSPREP00000033100	ENSPREP00000033113	ENSPREP00000033100	ENSPREP00000033113	Kalirin RhoGEF kinase b.	Uncharacterized protein.	0.876
ENSPREP00000033100	LOC103469400	ENSPREP00000033100	ENSPREP00000014429	Kalirin RhoGEF kinase b.	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	0.482
ENSPREP00000033113	ENSPREP00000023634	ENSPREP00000033113	ENSPREP00000023634	Uncharacterized protein.	Uncharacterized protein.	0.891
ENSPREP00000033113	ENSPREP00000023655	ENSPREP00000033113	ENSPREP00000023655	Uncharacterized protein.	Protein kinase domain-containing protein.	0.886
ENSPREP00000033113	ENSPREP00000026294	ENSPREP00000033113	ENSPREP00000026294	Uncharacterized protein.	Trio Rho guanine nucleotide exchange factor a.	0.578
ENSPREP00000033113	ENSPREP00000033100	ENSPREP00000033113	ENSPREP00000033100	Uncharacterized protein.	Kalirin RhoGEF kinase b.	0.876
ENSPREP00000033113	LOC103465265	ENSPREP00000033113	ENSPREP00000019032	Uncharacterized protein.	Uncharacterized protein.	0.864
ENSPREP00000033113	LOC103467350	ENSPREP00000033113	ENSPREP00000031428	Uncharacterized protein.	Uncharacterized protein.	0.850
ENSPREP00000033113	LOC103469400	ENSPREP00000033113	ENSPREP00000014429	Uncharacterized protein.	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	0.532
ENSPREP00000033113	dapk2	ENSPREP00000033113	ENSPREP00000013843	Uncharacterized protein.	Death-associated protein kinase 2b; Belongs to the protein kinase superfamily.	0.559
ENSPREP00000033113	dapk3	ENSPREP00000033113	ENSPREP00000020092	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.483